about summary refs log tree commit diff
AgeCommit message (Expand)Author
17 hoursSupport encrypting phenotypes. HEAD mainArun Isaac
17 hoursCompare complete frame in test_cat_*.Arun Isaac
17 hoursDo not import unused settings from hypothesis.Arun Isaac
17 hoursTest cat_phenotype.Arun Isaac
17 hoursAdd cat-phenotype subcommand.Arun Isaac
43 hoursRename cat subcommand to cat-genotype.Arun Isaac
43 hoursAdd is_phenotype_metadata_column.Arun Isaac
43 hoursDrop duplicates in generated test phenotype frames.Arun Isaac
43 hoursSet CI environment variable when building Guix package.Arun Isaac
43 hoursMerge, not concat, genotype frames.Arun Isaac
43 hoursTest cat_genotype.Arun Isaac
43 hoursAdd is_genotype_metadata_column.Arun Isaac
43 hoursDrop duplicates in generated test genotype frames.Arun Isaac
43 hoursCatenate an empty list of genotypes.Arun Isaac
47 hoursMove hypothesis strategies to separate file.Arun Isaac
2 daysAdd cat_genotype workhorse function.Arun Isaac
2 daysSuffix CLI subcommand functions with _command.Arun Isaac
3 daysDo not require output ciphertext file path.Arun Isaac
3 daysPass dtype to read_csv.Arun Isaac
3 daysUse open method of Path object, rather than the open function.Arun Isaac
3 daysDo not skip blank lines when reading TSV files.Arun Isaac
3 daysDecide to not use logging.Arun Isaac
3 daysTest for existence of output files.Arun Isaac
3 daysTitle case sentence.Arun Isaac
3 daysAdd phenotype file format and serialization functions.Arun Isaac
2025-08-08Clarify that the test suite is not for end users.Arun Isaac
2025-08-08Separate table of contents from introduction.Arun Isaac
2025-08-08Add table of contents to README.Arun Isaac
2025-08-08Replace csv extension with tsv extension on genotype files.Arun Isaac
2025-08-08Remove txt extension from summary files.Arun Isaac
2025-08-08Link to file formats documentation from README.Arun Isaac
2025-08-08Add example key file.Arun Isaac
2025-08-08Add example genotype file.Arun Isaac
2025-08-08Add example summary file.Arun Isaac
2025-08-08Reduce precision in test data files.Arun Isaac
2025-08-08Add instructions to install via Guix.Arun Isaac
2025-08-08Mark virtual environment creation as optional.Arun Isaac
2025-08-08Package as a CLI utility only, not a Python library.Arun Isaac
2025-08-06Subset to common SNPs.Arun Isaac
2025-08-06Standardize key files.Arun Isaac
2025-08-06Compute summary on encryption if not provided.Arun Isaac
2025-08-06Add simple workflow.Arun Isaac
2025-08-06Test joint workflow CLI.Arun Isaac
2025-08-06Standardize file formats in the likeness of plink files.Arun Isaac
2025-08-06Move negate to pyhegp.utils.Arun Isaac
2025-08-06Add gitignore.Arun Isaac
2025-08-06Loosen relative tolerance in test_pool_stats.Arun Isaac
2025-08-01Rename genotype_file argument in read_genotype.Arun Isaac
2025-08-01Test that read_genotype and write_genotype are inverses.Arun Isaac
2025-08-01Ensure that read genotype matrices have 2 dimensions.Arun Isaac
generated by cgit-pink 1.4.1 (git 2.36.1) at 2025-09-04 16:27:30 +0000