about summary refs log tree commit diff
AgeCommit message (Expand)Author
2025-09-08Link to PlantUML images built by the CI. HEAD mainArun Isaac
2025-09-08Specify PlantUML output filenames.Arun Isaac
2025-09-08Replace PlantUML image generation script with Guix computed-file.Arun Isaac
2025-09-08Hint at pyhegp commands in UML visualization.Arun Isaac
2025-09-08Add @startuml and @enduml tags.Arun Isaac
2025-09-08Split up hsmice test into smaller computed files.Arun Isaac
2025-09-08Exclude .guix and e2e-tests from the pyhegp package.Arun Isaac
2025-09-08Detail SNP dropping.Arun Isaac
2025-09-08Update README instructions with phenotype encryption.Arun Isaac
2025-09-08Comment on QTL checking code.Arun Isaac
2025-09-06Update r-mixed-model-gwas to 1.3.1.Arun Isaac
2025-09-06Add end-to-end tests for hsmice dataset.Arun Isaac
2025-09-06Construct empty genotype frame using series.Arun Isaac
2025-09-06Roll cat_data_frames into cat_genotype.Arun Isaac
2025-09-06Catenate phenotype frames along the index.Arun Isaac
2025-09-06Split catenable phenotype frames along the index.Arun Isaac
2025-09-06Generalize split_data_frame to split along any axis.Arun Isaac
2025-09-06Simplify split_data_frame so it is more composable.Arun Isaac
2025-09-05Generate unique SNPs in genotype frames without dropping duplicates.Arun Isaac
2025-09-05Deduplicate genotype frame metadata generation.Arun Isaac
2025-09-05Drop SNPs with a zero standard deviation.Arun Isaac
2025-09-05Fix typo in comment: tha->that.Arun Isaac
2025-09-04Avoid wildcard import from helpers.strategies.Arun Isaac
2025-09-04Limit values in genotype and phenotype strategies.Arun Isaac
2025-09-04Test that ciphertext does not contain NA values.Arun Isaac
2025-09-04Parameterize number of samples in phenotype frame strategy.Arun Isaac
2025-09-04Parameterize number of samples in genotype frame strategy.Arun Isaac
2025-09-04Parameterize presence of reference column in genotype frame strategy.Arun Isaac
2025-09-04Add keys strategy.Arun Isaac
2025-09-04Raise exception if data frame to be written has NA values.Arun Isaac
2025-09-04Add --force flag to encrypt subcommand permitting file overwriting.Arun Isaac
2025-09-04Support encrypting phenotypes.Arun Isaac
2025-09-04Compare complete frame in test_cat_*.Arun Isaac
2025-09-04Do not import unused settings from hypothesis.Arun Isaac
2025-09-04Test cat_phenotype.Arun Isaac
2025-09-04Add cat-phenotype subcommand.Arun Isaac
2025-09-02Rename cat subcommand to cat-genotype.Arun Isaac
2025-09-02Add is_phenotype_metadata_column.Arun Isaac
2025-09-02Drop duplicates in generated test phenotype frames.Arun Isaac
2025-09-02Set CI environment variable when building Guix package.Arun Isaac
2025-09-02Merge, not concat, genotype frames.Arun Isaac
2025-09-02Test cat_genotype.Arun Isaac
2025-09-02Add is_genotype_metadata_column.Arun Isaac
2025-09-02Drop duplicates in generated test genotype frames.Arun Isaac
2025-09-02Catenate an empty list of genotypes.Arun Isaac
2025-09-02Move hypothesis strategies to separate file.Arun Isaac
2025-09-02Add cat_genotype workhorse function.Arun Isaac
2025-09-02Suffix CLI subcommand functions with _command.Arun Isaac
2025-09-01Do not require output ciphertext file path.Arun Isaac
2025-09-01Pass dtype to read_csv.Arun Isaac