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| author | Arun Isaac | 2025-08-08 15:11:27 +0100 |
|---|---|---|
| committer | Arun Isaac | 2025-08-08 15:13:31 +0100 |
| commit | 3dfd429ce4de41500ee8b6831d6cec39b28319b4 (patch) | |
| tree | f2507cc799bf913ef50238a70178dccc73d7f669 | |
| parent | 2f0046d8a67bb48152ed0fedf58f0d1d0ea196dc (diff) | |
| download | pyhegp-3dfd429ce4de41500ee8b6831d6cec39b28319b4.tar.gz pyhegp-3dfd429ce4de41500ee8b6831d6cec39b28319b4.tar.lz pyhegp-3dfd429ce4de41500ee8b6831d6cec39b28319b4.zip | |
Add example summary file.
| -rw-r--r-- | doc/file-formats.md | 16 |
1 files changed, 15 insertions, 1 deletions
diff --git a/doc/file-formats.md b/doc/file-formats.md index 02df7ef..888f3db 100644 --- a/doc/file-formats.md +++ b/doc/file-formats.md @@ -10,7 +10,21 @@ The data section is a tab-separated table of numbers. The first line MUST be a h The `reference` column is optional, and SHOULD be absent in pooled summary files. Here is an example summary file. -`TODO: Add example.` +``` +# pyhegp summary file version 1 +# number-of-samples 100 +chromosome position reference mean standard-deviation +chr11 3200246 G 0.1677 0.3915 +chr11 3205355 T 0.1766 0.3599 +chr11 3218908 A 0.1818 0.3169 +chr11 3414044 A -0.2420 0.1606 +chr11 3460427 C -0.2408 0.1593 +chr11 3462290 A -0.2383 0.1670 +chr11 3462323 A -0.2388 0.1653 +chr11 3462325 T -0.2386 0.1658 +chr11 3462348 T -0.2371 0.1702 +chr11 3464016 A -0.2400 0.1623 +``` ## genotype file |