Age | Commit message (Expand) | Author |
2020-04-22 | Fixing ShEx expression, one ? too much | lltommy |
2020-04-22 | Forgot to add _id | lltommy |
2020-04-22 | Including restrictions to the host status | lltommy |
2020-04-22 | Small changes all around, trying to make the importer/metadata better | lltommy |
2020-04-21 | Work around CWL content size limit by chunking | Peter Amstutz |
2020-04-21 | add noLinkCheck to specimen_source2 | Peter Amstutz |
2020-04-21 | Tweak handling of "coverage" also fix typo | Peter Amstutz |
2020-04-21 | Working on NCBI import | Peter Amstutz |
2020-04-21 | Updated shex and manditory fields and stuff | lltommy |
2020-04-20 | Reconsidered these should be noLinkCheck | Peter Amstutz |
2020-04-20 | Add identity:true to collection_location | Peter Amstutz |
2020-04-20 | Schema changes from @LLTommy | Peter Amstutz |
2020-04-20 | Better handling of duplicate sequences | Peter Amstutz |
2020-04-20 | Make doc not contradict option list | Adam Novak |
2020-04-20 | Put back Intersex with the closest PATO equivalent | Adam Novak |
2020-04-20 | Add ShEx validation | Peter Amstutz |
2020-04-20 | Making collection date and collection location MANDATORY fields, turning orci... | lltommy |
2020-04-20 | Fixing string -> URI in speciman, plus other things | lltommy |
2020-04-19 | small updates to the yaml schema, updating the example files | lltommy |
2020-04-19 | Updating NCBI dictonaries, adding UI options, small yaml schema changes | lltommy |
2020-04-19 | Merge pull request #24 from adamnovak/dropdowns | Pjotr Prins |
2020-04-18 | Extending yaml schema a bit and adding additional information for the UI | lltommy |
2020-04-17 | Copy NCIT IRIs back to schema doc | Adam Novak |
2020-04-17 | Spruce up the options file and add missing values | Adam Novak |
2020-04-17 | Create option dropdowns from an options file | Adam Novak |
2020-04-15 | Typo: submitter_orchid -> submitter_orcid | Stian Soiland-Reyes |
2020-04-15 | Changing vaccination URI | lltommy |
2020-04-15 | Fixing small typo | lltommy |
2020-04-15 | relaxing regEx cause orichids can look like whatever it seems, not only numbers | lltommy |
2020-04-14 | Updated yaml schema and examples - plus ShEX shape to go along with it. Still... | lltommy |
2020-04-13 | Inject path to find module bh20sequploader | Pjotr Prins |
2020-04-13 | Add __init__.py and fix imports | Peter Amstutz |
2020-04-13 | Closes #5 | Pjotr Prins |
2020-04-13 | Starting to turn values into IRIs ... | lltommy |
2020-04-11 | Adding noLinkCheck to root | lltommy |
2020-04-11 | Adding descriptions to the yml schema, slight changes to the yml schema | lltommy |
2020-04-10 | Propagating metadata to output works now. | Peter Amstutz |
2020-04-10 | Fix swapped fasta/fastq | Peter Amstutz |
2020-04-10 | Add qc_fasta | Peter Amstutz |
2020-04-10 | Fix up fasta/fastq validation | Peter Amstutz |
2020-04-10 | Validate & propagate metadata | Peter Amstutz |
2020-04-10 | Merge pull request #6 from uniqueg/fa_fq_validation | Pjotr Prins |
2020-04-10 | Fixed TypeError: 'module' object is not callable | Pjotr Prins |
2020-04-10 | validate seq format with magic file | Alex Kanitz |
2020-04-10 | Updating schema and examples, including URIs | lltommy |
2020-04-09 | Moved Guix documentation into separate file (as it confused people ;) | Pjotr Prins |
2020-04-09 | Add "sequencefile" for the metadata subject. | Peter Amstutz |
2020-04-09 | Adding functionality of turning keys into ontology terms (URI). This is work ... | lltommy |
2020-04-09 | Updating schema and examples. This is still work in progress but we get there | lltommy |
2020-04-08 | Fastq now runs through fastq2fasta pipeline | Peter Amstutz |