aboutsummaryrefslogtreecommitdiff
path: root/bh20sequploader/qc_metadata.py
AgeCommit message (Expand)Author
2020-08-28added control (locally and in the validation) that sample_id has to be the sa...AndreaGuarracino
2020-07-08Give uploader an option to trust local validation (for batch imports)•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> upload-download-statusPeter Amstutz
2020-07-08Avoid redundant loading of schemaPeter Amstutz
2020-07-08Hack in a valid-uri check•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Peter Amstutz
2020-07-05Add bh20-seq-analyzer --print-status•••Get status from new property "status: validated/rejected" Also store QC fail error message. Peter Amstutz
2020-05-28Web: debugging metadata submissionPjotr Prins
2020-04-20Add ShEx validation•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Peter Amstutz
2020-04-10Propagating metadata to output works now.•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Peter Amstutz
2020-04-10Validate & propagate metadataPeter Amstutz
2020-04-08Fastq now runs through fastq2fasta pipeline•••then gets added to pangenome analysis. Peter Amstutz
2020-04-07Add metadata validation with schema-saladPeter Amstutz
2020-04-07adding dummy metadata qc to the projectlltommy