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Diffstat (limited to 'workflows/pull-data/genbank/ref.py')
| -rw-r--r-- | workflows/pull-data/genbank/ref.py | 11 |
1 files changed, 0 insertions, 11 deletions
diff --git a/workflows/pull-data/genbank/ref.py b/workflows/pull-data/genbank/ref.py index e998d37..66c9fb0 100644 --- a/workflows/pull-data/genbank/ref.py +++ b/workflows/pull-data/genbank/ref.py @@ -1,16 +1,5 @@ # ---- BELOW IS JUST FOR REFERENCE ---- - GBReference = GBSeq_references.find('GBReference') - if GBReference is not None: - GBReference_journal = GBReference.find('GBReference_journal') - - if GBReference_journal is not None and GBReference_journal.text != 'Unpublished': - if 'Submitted' in GBReference_journal.text: - submitter['submitter_name'] = ["{}".format(GBReference_journal.text.split(') ')[1].split(',')[0].strip())] - submitter['submitter_address'] = ','.join(GBReference_journal.text.split(') ')[1].split(',')[1:]).strip() - else: - submitter['additional_submitter_information'] = GBReference_journal.text - # This script download and prepare data and metadata for assemblies samples technology['assembly_method'] = 'http://purl.obolibrary.org/obo/GENEPIO_0001628' |