1 files changed, 2 insertions, 2 deletions
diff --git a/bh20sequploader/qc_fasta.py b/bh20sequploader/qc_fasta.py
index e3d4fe7..e47d66b 100644
--- a/bh20sequploader/qc_fasta.py
+++ b/bh20sequploader/qc_fasta.py
@@ -21,8 +21,8 @@ def qc_fasta(sequence):
                 raise ValueError("FASTA file contains multiple entries")
                 break
         sequence.seek(0)
-        return "reads.fastq"
-    elif seq_type == "text/fastq":
         return "sequence.fasta"
+    elif seq_type == "text/fastq":
+        return "reads.fastq"
     else:
         raise ValueError("Sequence file does not look like FASTA or FASTQ")