diff options
| -rw-r--r-- | bh20sequploader/bh20seq-schema.yml | 30 |
1 files changed, 24 insertions, 6 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml index 38cfb48..fd9e854 100644 --- a/bh20sequploader/bh20seq-schema.yml +++ b/bh20sequploader/bh20seq-schema.yml @@ -3,14 +3,20 @@ $graph: - name: hostSchema type: record fields: + host_species: + type: string + jsonldPredicate: + _id: http://www.ebi.ac.uk/efo/EFO_0000532 host_id: string - host_species: string host_common_name: string? host_sex: string? host_age: int? host_age_unit: string? host_health_status: string? - host_treatment: string? + host_treatment: + type: string? + jsonldPredicate: + _id: http://www.ebi.ac.uk/efo/EFO_0000727 additional_host_information: string? - name: sampleSchema @@ -20,7 +26,10 @@ $graph: collecting_institution: string specimen_source: string? collection_date: string? - collection_location: string? + collection_location: + type: string? + jsonldPredicate: + _id: https://schema.org/fromLocation sample_storage_conditions: string? additional_collection_information: string? @@ -33,9 +42,18 @@ $graph: - name: technologySchema type: record fields: - sample_sequencing_technology: string - sequence_assembly_method: string? - sequencing_coverage: string? + sample_sequencing_technology: + type: string + jsonldPredicate: + _id: http://www.ebi.ac.uk/efo/EFO_0000532 + sequence_assembly_method: + type: string? + jsonldPredicate: + _id: http://www.ebi.ac.uk/efo/EFO_0002699 + sequencing_coverage: + type: string? + jsonldPredicate: + _id: http://purl.obolibrary.org/obo/FLU_0000848 - name: submitterSchema type: record |