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| author | AndreaGuarracino | 2021-01-07 23:02:54 +0100 |
|---|---|---|
| committer | AndreaGuarracino | 2021-01-07 23:02:54 +0100 |
| commit | 141e619929cee17018417d71111063015e73c366 (patch) | |
| tree | baa8f98aaed7aef615d37b5560a988381ac8030f /workflows/yamlfa2ttl/yamlfa2ttl.cwl | |
| parent | 430090a65786b0b9dde9e1319a740f95579d0275 (diff) | |
| download | bh20-seq-resource-141e619929cee17018417d71111063015e73c366.tar.gz bh20-seq-resource-141e619929cee17018417d71111063015e73c366.tar.lz bh20-seq-resource-141e619929cee17018417d71111063015e73c366.zip | |
added check_sequence workflow and script
Diffstat (limited to 'workflows/yamlfa2ttl/yamlfa2ttl.cwl')
| -rw-r--r-- | workflows/yamlfa2ttl/yamlfa2ttl.cwl | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/workflows/yamlfa2ttl/yamlfa2ttl.cwl b/workflows/yamlfa2ttl/yamlfa2ttl.cwl index 1dce9ca..143fc9d 100644 --- a/workflows/yamlfa2ttl/yamlfa2ttl.cwl +++ b/workflows/yamlfa2ttl/yamlfa2ttl.cwl @@ -18,7 +18,15 @@ steps: in: path_fasta: path_fasta format_to_check: format_to_check + doc: the input has to be a valid FASTA format file out: [] run: check_format.cwl + check_sequence: + in: + path_fasta: path_fasta + doc: the input sequence has to be enough similar to the reference + out: [] + run: check_sequence.cwl + outputs: [] |