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| author | Pjotr Prins | 2021-01-02 12:06:08 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2021-01-02 12:06:08 +0000 |
| commit | 6fd44b33eec7e72da5578ddef88a3ad18576bc1f (patch) | |
| tree | c62f6bf14210dbacb3d7a0631c0410393ff9d8b3 /workflows/pull-data/genbank/README.md | |
| parent | a029c2329e748874bee88317e44d3f47547f71d8 (diff) | |
| download | bh20-seq-resource-6fd44b33eec7e72da5578ddef88a3ad18576bc1f.tar.gz bh20-seq-resource-6fd44b33eec7e72da5578ddef88a3ad18576bc1f.tar.lz bh20-seq-resource-6fd44b33eec7e72da5578ddef88a3ad18576bc1f.zip | |
transform-genbank-xml2yamlfa.py rewrite
Diffstat (limited to 'workflows/pull-data/genbank/README.md')
| -rw-r--r-- | workflows/pull-data/genbank/README.md | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pull-data/genbank/README.md b/workflows/pull-data/genbank/README.md index 5597234..b5bac84 100644 --- a/workflows/pull-data/genbank/README.md +++ b/workflows/pull-data/genbank/README.md @@ -8,7 +8,7 @@ # --- fetch XML python3 update-from-genbank.py --ids genbank_ids.txt --out ~/tmp/genbank # --- Transform to YAML and FASTA -transform-genbank-xml2yamlfa --dir ~/tmp/genbank id --outdir ~/tmp/pubseq +python3 transform-genbank-xml2yamlfa --out ~/tmp/pubseq file(s) ``` # TODO |