diff options
| author | Pjotr Prins | 2021-01-26 16:22:19 +0000 |
|---|---|---|
| committer | GitHub | 2021-01-26 16:22:19 +0000 |
| commit | a54122023ef2bde4ef4fc39355b3491678bbf773 (patch) | |
| tree | 150bef4a574486db9e7c16d87be89ad219d84bb1 /workflows/phylogeny/metadata.cwl | |
| parent | b112b3203e34ea61dfdf802bce5036f938eaa774 (diff) | |
| parent | 4842117f530aba08b4a253aee533a8d4802b1c12 (diff) | |
| download | bh20-seq-resource-a54122023ef2bde4ef4fc39355b3491678bbf773.tar.gz bh20-seq-resource-a54122023ef2bde4ef4fc39355b3491678bbf773.tar.lz bh20-seq-resource-a54122023ef2bde4ef4fc39355b3491678bbf773.zip | |
Merge pull request #124 from urbanslug/master
Add phylogeny workflow
Diffstat (limited to 'workflows/phylogeny/metadata.cwl')
| -rw-r--r-- | workflows/phylogeny/metadata.cwl | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/workflows/phylogeny/metadata.cwl b/workflows/phylogeny/metadata.cwl new file mode 100644 index 0000000..4ce6e17 --- /dev/null +++ b/workflows/phylogeny/metadata.cwl @@ -0,0 +1,33 @@ +#!/usr/bin/env cwl-runner + +cwlVersion: v1.1 + +class: CommandLineTool +baseCommand: python + +inputs: + main_py_script: + type: File + inputBinding: + position: 1 + + metadata: + type: string + inputBinding: + position: 2 + + coverage_matrix: + type: File + inputBinding: + position: 3 + + coverage_matrix_with_metadata: + type: string + inputBinding: + position: 4 + +outputs: + coverage_matrix_with_metadata_out: + type: File + outputBinding: + glob: '*.metadata.tsv'
\ No newline at end of file |