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authorAndreaGuarracino2020-11-12 18:50:13 +0100
committerAndreaGuarracino2020-11-12 18:50:13 +0100
commitdbd32a3042099d52d30028364ffdadcd0f60ede2 (patch)
tree3d482ffb952c14e34afc063298ab5dcde066b32f /example
parent87440554e57d5c5ed846e98a3b3ec428330e15e8 (diff)
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managed the assembly_method in the scripts, doc, and the example templates
Diffstat (limited to 'example')
-rw-r--r--example/esr_example.yaml1
-rw-r--r--example/uthsc_example.yaml1
2 files changed, 2 insertions, 0 deletions
diff --git a/example/esr_example.yaml b/example/esr_example.yaml
index b3e97d5..693aff3 100644
--- a/example/esr_example.yaml
+++ b/example/esr_example.yaml
@@ -25,6 +25,7 @@ virus:
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
alignment_protocol: https://github.com/ESR-NZ/NZ_SARS-CoV-2_genomics
+ assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
additional_technology_information: "Artic V3 workflow"
submitter:
diff --git a/example/uthsc_example.yaml b/example/uthsc_example.yaml
index 3bdbf6f..2384114 100644
--- a/example/uthsc_example.yaml
+++ b/example/uthsc_example.yaml
@@ -25,6 +25,7 @@ virus:
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
alignment_protocol: guppy
+ assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
additional_technology_information: Optional free text field for additional information
submitter: