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| author | lltommy | 2020-04-14 22:56:33 +0200 |
|---|---|---|
| committer | lltommy | 2020-04-14 22:56:33 +0200 |
| commit | b106dc843cdc60902b0c6d423291584086fd2868 (patch) | |
| tree | 59b0f263f5f8bc6201ed3e309c98a88d11d348dd /example | |
| parent | 7ff1350f0509f85ebe40ff6e56861546045e83d3 (diff) | |
| download | bh20-seq-resource-b106dc843cdc60902b0c6d423291584086fd2868.tar.gz bh20-seq-resource-b106dc843cdc60902b0c6d423291584086fd2868.tar.lz bh20-seq-resource-b106dc843cdc60902b0c6d423291584086fd2868.zip | |
Updated yaml schema and examples - plus ShEX shape to go along with it. Still work in progress but getting better and better I guess
Diffstat (limited to 'example')
| -rw-r--r-- | example/metadata.yaml | 9 | ||||
| -rw-r--r-- | example/minimal_example.yaml | 3 |
2 files changed, 7 insertions, 5 deletions
diff --git a/example/metadata.yaml b/example/metadata.yaml index 15e4e44..5d9cffc 100644 --- a/example/metadata.yaml +++ b/example/metadata.yaml @@ -3,7 +3,6 @@ id: placeholder host: host_id: XX1 host_species: http://purl.obolibrary.org/obo/NCBITaxon_9606 - host_common_name: string host_sex: http://purl.obolibrary.org/obo/NCIT_C27993 host_age: 20 host_age_unit: http://purl.obolibrary.org/obo/UO_0000036 @@ -16,8 +15,8 @@ sample: collector_name: XXX collecting_institution: XXX specimen_source: XXX - collection_date: XXX - collection_location: http://purl.obolibrary.org/obo/NCIT_C16428 + collection_date: 2020-01 + collection_location: http://purl.obolibrary.org/obo/GAZ_00002459 sample_storage_conditions: XXX additional_collection_information: XXX @@ -28,7 +27,7 @@ virus: technology: sample_sequencing_technology: XX sequence_assembly_method: XX - sequencing_coverage: 70x + sequencing_coverage: 70 submitter: submitter_name: tester @@ -38,4 +37,4 @@ submitter: provider_sample_id: string submitter_sample_id: string authors: testAuthor - submitter_orchid: X12 + submitter_orchid: https://orcid.org/0000-0002-1825-0097 diff --git a/example/minimal_example.yaml b/example/minimal_example.yaml index 43adfa8..0080c6d 100644 --- a/example/minimal_example.yaml +++ b/example/minimal_example.yaml @@ -10,6 +10,9 @@ sample: collector_name: XXX collecting_institution: XXX +virus: + virus_species: http://purl.obolibrary.org/obo/NCBITaxon_2697049 + technology: sample_sequencing_technology: XX |