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authorPjotr Prins2020-10-27 12:17:23 +0000
committerPjotr Prins2020-10-27 12:17:23 +0000
commit73824fe1f94cb965f6de9d5b43bf2eb48241d3ea (patch)
treee89f1e2202f23d3e8679faf99eab029f6ac749f5 /doc/INSTALL.md
parentbef48abab5e8596703dd825b2d920ea25314d868 (diff)
downloadbh20-seq-resource-73824fe1f94cb965f6de9d5b43bf2eb48241d3ea.tar.gz
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Updating docs
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diff --git a/doc/INSTALL.md b/doc/INSTALL.md
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@@ -38,7 +38,11 @@ Note that python-pyshex is packaged in
http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics
so you'll need it to the GUIX_PACKAGE_PATH - see the README in that
-repository.
+repository. E.g.
+
+```sh
+env GUIX_PACKAGE_PATH=~/iwrk/opensource/guix/guix-bioinformatics/ ~/opt/guix/bin/guix environment -C guix --ad-hoc git python python-flask python-pyyaml python-pycurl python-magic nss-certs python-pyshex python-pyyaml --network openssl python-pyshex python-pyshexc minimap2 python-schema-salad python-arvados-python-client --share=/export/tmp -- env TMPDIR=/export/tmp python3 bh20sequploader/main.py --help
+```
### Using the Web Uploader