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| author | lltommy | 2020-04-20 09:42:57 +0200 |
|---|---|---|
| committer | lltommy | 2020-04-20 09:42:57 +0200 |
| commit | fdbaeeb5ed29f6a2b1a9de466cb62e6fd6849b85 (patch) | |
| tree | f6e17b97aa816f81d3b890db1e3b92d594e622d7 /bh20sequploader | |
| parent | a096dbb70e507fb1d2242378a091f1baab645cae (diff) | |
| download | bh20-seq-resource-fdbaeeb5ed29f6a2b1a9de466cb62e6fd6849b85.tar.gz bh20-seq-resource-fdbaeeb5ed29f6a2b1a9de466cb62e6fd6849b85.tar.lz bh20-seq-resource-fdbaeeb5ed29f6a2b1a9de466cb62e6fd6849b85.zip | |
Fixing string -> URI in speciman, plus other things
Diffstat (limited to 'bh20sequploader')
| -rw-r--r-- | bh20sequploader/bh20seq-schema.yml | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml index c48ebce..5000f08 100644 --- a/bh20sequploader/bh20seq-schema.yml +++ b/bh20sequploader/bh20seq-schema.yml @@ -78,11 +78,13 @@ $graph: type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001479 + _type: "@id" specimen_source2: doc: Method how the specimen was derived as NCIT IRI, e.g. http://purl.obolibrary.org/obo/NCIT_C155835 (=throat swabb) type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001479 + _type: "@id" collection_date: doc: Date when the sample was taken type: string? @@ -95,7 +97,7 @@ $graph: _id: http://purl.obolibrary.org/obo/GAZ_00000448 _type: "@id" sample_storage_conditions: - doc: Information aboout storage of a specified type, e.g. frozen specimen, paraffin, fresh .... + doc: Information about storage of a specified type, e.g. frozen specimen, paraffin, fresh .... type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001472 @@ -138,11 +140,13 @@ $graph: type: string jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0600047 + _type: "@id" sample_sequencing_technology2: doc: Technology that was used to sequence this sample (e.g Sanger, Nanopor MiniION) type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0600047 + _type: "@id" sequence_assembly_method: doc: Protocol which provides instructions on the alignment of sequencing reads to reference genome type: string? |