index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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analysis-refactor
Add "validated" and "running workflows" tables to status
Peter Amstutz
4 years
fasta-subset-from-query
Extract PDH from result and construct URIs from that
Peter Amstutz
4 years
generate-cwl
Use default output of pipeline
Arun Isaac
4 years
master
Jetson test sequence
Pjotr Prins
4 years
new_assembly_method_field
added the assembly_method field to distinguish de-novo assemblies from refere...
AndreaGuarracino
4 years
pangenome_workflow_abpoa
abPOA works better starting from shorter sequences
AndreaGuarracino
4 years
upload-download-status
Give uploader an option to trust local validation (for batch imports)
Peter Amstutz
4 years
uuid-for-resource
Use arvados uuids for RDF subjects.
Peter Amstutz
4 years
yamlfa2ttl
sample_id in the FASTA has to match the sample_id in the YAML
AndreaGuarracino
4 years
Age
Commit message
Author
2020-07-08
Give uploader an option to trust local validation (for batch imports)
upload-download-status
Peter Amstutz
2020-07-08
Uploader checks for duplicates
Peter Amstutz
2020-07-08
Avoid redundant loading of schema
Peter Amstutz
2020-07-08
Add --revalidate and fix checking/updating properties.
Peter Amstutz
2020-07-08
Hack in a valid-uri check
Peter Amstutz
2020-07-08
Get count from arvados
Peter Amstutz
2020-07-08
Fetch status as anonymous user
Peter Amstutz
2020-07-08
Split upload tab. Add upload status tab.
Peter Amstutz
2020-07-08
Merge pull request #89 from proccaserra/patch-1
LLTommy
2020-07-07
Merge branch 'master' of https://github.com/arvados/bh20-seq-resource
lltommy
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