From fdbaeeb5ed29f6a2b1a9de466cb62e6fd6849b85 Mon Sep 17 00:00:00 2001
From: lltommy
Date: Mon, 20 Apr 2020 09:42:57 +0200
Subject: Fixing string -> URI in speciman, plus other things

---
 bh20sequploader/bh20seq-schema.yml | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

(limited to 'bh20sequploader')

diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml
index c48ebce..5000f08 100644
--- a/bh20sequploader/bh20seq-schema.yml
+++ b/bh20sequploader/bh20seq-schema.yml
@@ -78,11 +78,13 @@ $graph:
       type: string?
       jsonldPredicate:
           _id: http://purl.obolibrary.org/obo/OBI_0001479
+          _type: "@id"
     specimen_source2:
       doc: Method how the specimen was derived as NCIT IRI, e.g. http://purl.obolibrary.org/obo/NCIT_C155835 (=throat swabb)
       type: string?
       jsonldPredicate:
           _id: http://purl.obolibrary.org/obo/OBI_0001479
+          _type: "@id"
     collection_date:
       doc: Date when the sample was taken
       type: string?
@@ -95,7 +97,7 @@ $graph:
         _id: http://purl.obolibrary.org/obo/GAZ_00000448
         _type: "@id"
     sample_storage_conditions:
-      doc: Information aboout storage of a specified type, e.g.  frozen specimen, paraffin, fresh ....
+      doc: Information about storage of a specified type, e.g.  frozen specimen, paraffin, fresh ....
       type: string?
       jsonldPredicate:
           _id: http://purl.obolibrary.org/obo/OBI_0001472
@@ -138,11 +140,13 @@ $graph:
       type: string
       jsonldPredicate:
         _id: http://purl.obolibrary.org/obo/OBI_0600047
+        _type: "@id"
     sample_sequencing_technology2:
       doc: Technology that was used to sequence this sample (e.g Sanger, Nanopor MiniION)
       type: string?
       jsonldPredicate:
         _id: http://purl.obolibrary.org/obo/OBI_0600047
+        _type: "@id"
     sequence_assembly_method:
       doc: Protocol which provides instructions on the alignment of sequencing reads to reference genome
       type: string?
-- 
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