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| author | lltommy | 2020-07-08 23:50:36 +0200 |
|---|---|---|
| committer | lltommy | 2020-07-08 23:50:36 +0200 |
| commit | b67df8c01c7051a5faf65928cbdb93815fd14a9f (patch) | |
| tree | 5b28d9da7b0c40b7318d10705ccdeebf617ab926 | |
| parent | 6e0f9f18167377bac073d7715b89e7ddbf1fe72d (diff) | |
| download | bh20-seq-resource-b67df8c01c7051a5faf65928cbdb93815fd14a9f.tar.gz bh20-seq-resource-b67df8c01c7051a5faf65928cbdb93815fd14a9f.tar.lz bh20-seq-resource-b67df8c01c7051a5faf65928cbdb93815fd14a9f.zip | |
Try to fix lab_address wrong predicate, fix submitter shape on the way and hopefully brought it in synch with the yaml
| -rw-r--r-- | bh20sequploader/bh20seq-schema.yml | 6 | ||||
| -rw-r--r-- | bh20sequploader/bh20seq-shex.rdf | 2 |
2 files changed, 4 insertions, 4 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml index 19c794a..a8ab920 100644 --- a/bh20sequploader/bh20seq-schema.yml +++ b/bh20sequploader/bh20seq-schema.yml @@ -197,15 +197,15 @@ $graph: doc: Address of the laboratory where the sample was taken type: string? jsonldPredicate: - _id: http://purl.obolibrary.org/obo/OBI_0600047 + _id: http://purl.obolibrary.org/obo/NCIT_C37900 provider_sample_id: type: string? jsonldPredicate: - _id: http://purl.obolibrary.org/obo/NCIT_C37900 + _id: http://www.ebi.ac.uk/efo/EFO_0001741 submitter_sample_id: type: string? jsonldPredicate: - _id: http://www.ebi.ac.uk/efo/EFO_0001741 + _id: http://purl.obolibrary.org/obo/NCIT_C42781 publication: doc: Reference to publication of this sample (e.g. DOI, pubmed ID, ...) type: string? diff --git a/bh20sequploader/bh20seq-shex.rdf b/bh20sequploader/bh20seq-shex.rdf index 6b196bd..965229c 100644 --- a/bh20sequploader/bh20seq-shex.rdf +++ b/bh20sequploader/bh20seq-shex.rdf @@ -47,9 +47,9 @@ PREFIX wikidata: <http://www.wikidata.org/entity/> sio:SIO_000116 xsd:string *; sio:SIO_000172 xsd:string ?; obo:NCIT_C37984 xsd:string ?; - obo:OBI_0600047 xsd:string ?; obo:NCIT_C37900 xsd:string ?; efo:EFO_0001741 xsd:string ?; + obo:NCIT_C42781 xsd:string ?; obo:NCIT_C19026 xsd:string ?; sio:SIO_000115 /https:\u002F\u002Forcid.org\u002F.{4}-.{4}-.{4}-.{4}/ {0,10}; sio:SIO_001167 xsd:string ?; |