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| author | Peter Amstutz | 2020-07-03 21:24:00 +0000 |
|---|---|---|
| committer | Peter Amstutz | 2020-07-03 21:24:00 +0000 |
| commit | 33ed39e9e82d4f8e4af27f2f0d0676977d367137 (patch) | |
| tree | ac2e7cc6ca35080e85bc36dbe03f38304073108b | |
| parent | 36f5c5b58a2de662eae9f379e66a9695d300dc2e (diff) | |
| download | bh20-seq-resource-33ed39e9e82d4f8e4af27f2f0d0676977d367137.tar.gz bh20-seq-resource-33ed39e9e82d4f8e4af27f2f0d0676977d367137.tar.lz bh20-seq-resource-33ed39e9e82d4f8e4af27f2f0d0676977d367137.zip | |
Add upload.cwl
| -rw-r--r-- | scripts/upload.cwl | 13 |
1 files changed, 13 insertions, 0 deletions
diff --git a/scripts/upload.cwl b/scripts/upload.cwl new file mode 100644 index 0000000..0fed09a --- /dev/null +++ b/scripts/upload.cwl @@ -0,0 +1,13 @@ +cwlVersion: v1.1 +class: CommandLineTool +inputs: + fasta: File + metadata: File +outputs: [] +requirements: + DockerRequirement: + dockerPull: bh20-seq-uploader/import + NetworkAccess: + networkAccess: true +baseCommand: bh20-seq-uploader +arguments: [--skip-qc, $(inputs.metadata), $(inputs.fasta)] |