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BranchCommit messageAuthorAge
analysis-refactorAdd "validated" and "running workflows" tables to statusPeter Amstutz4 years
fasta-subset-from-queryExtract PDH from result and construct URIs from thatPeter Amstutz3 years
generate-cwlUse default output of pipelineArun Isaac3 years
masterJetson test sequencePjotr Prins3 years
new_assembly_method_fieldadded the assembly_method field to distinguish de-novo assemblies from refere...AndreaGuarracino3 years
pangenome_workflow_abpoaabPOA works better starting from shorter sequencesAndreaGuarracino3 years
upload-download-statusGive uploader an option to trust local validation (for batch imports)Peter Amstutz4 years
uuid-for-resourceUse arvados uuids for RDF subjects.Peter Amstutz3 years
yamlfa2ttlsample_id in the FASTA has to match the sample_id in the YAMLAndreaGuarracino3 years
 
 
AgeCommit messageAuthor
2020-11-09Extract PDH from result and construct URIs from thatfasta-subset-from-queryPeter Amstutz
2020-11-09Make resource link work for both portable data hashes and sample idPeter Amstutz
2020-11-09Make it so "pangenome analysis" only runs collect-seqs.Peter Amstutz
2020-11-09Rename schema param to metadataSchemaPeter Amstutz
2020-11-09Extract subset of the all-sequences fasta by running a sparql query.Peter Amstutz
2020-11-08Uploaded UTHSC sequencesPjotr Prins
2020-11-08UTHSC samplesPjotr Prins
2020-11-07Tests: added SPARQL testPjotr Prins
2020-11-07Tests: add runner and frame for SPARQLPjotr Prins
2020-11-07RDF: use URIsPjotr Prins
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