From 3dfd429ce4de41500ee8b6831d6cec39b28319b4 Mon Sep 17 00:00:00 2001 From: Arun Isaac Date: Fri, 8 Aug 2025 15:11:27 +0100 Subject: Add example summary file. --- doc/file-formats.md | 16 +++++++++++++++- 1 file changed, 15 insertions(+), 1 deletion(-) diff --git a/doc/file-formats.md b/doc/file-formats.md index 02df7ef..888f3db 100644 --- a/doc/file-formats.md +++ b/doc/file-formats.md @@ -10,7 +10,21 @@ The data section is a tab-separated table of numbers. The first line MUST be a h The `reference` column is optional, and SHOULD be absent in pooled summary files. Here is an example summary file. -`TODO: Add example.` +``` +# pyhegp summary file version 1 +# number-of-samples 100 +chromosome position reference mean standard-deviation +chr11 3200246 G 0.1677 0.3915 +chr11 3205355 T 0.1766 0.3599 +chr11 3218908 A 0.1818 0.3169 +chr11 3414044 A -0.2420 0.1606 +chr11 3460427 C -0.2408 0.1593 +chr11 3462290 A -0.2383 0.1670 +chr11 3462323 A -0.2388 0.1653 +chr11 3462325 T -0.2386 0.1658 +chr11 3462348 T -0.2371 0.1702 +chr11 3464016 A -0.2400 0.1623 +``` ## genotype file -- cgit 1.4.1