aboutsummaryrefslogtreecommitdiff
path: root/workflows/yamlfa2ttl/check_metadata.cwl
blob: 593155b880fb189988a05913d504ed351558467c (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
#!/usr/bin/env cwl-runner

cwlVersion: v1.1
class: CommandLineTool
baseCommand: python3

inputs:
  script:
    type: File
    inputBinding: {position: 1}
    default: {class: File, location: check_metadata.py}
  path_yaml:
    type: string
    inputBinding: {position: 2}
  path_fasta:
    type: string
    inputBinding: {position: 3}
  path_schema_yaml:
    type: File
    inputBinding: {position: 4}
    default: {class: File, location: ../../bh20sequploader/bh20seq-schema.yml}
  path_shex_rdf:
    type: File
    inputBinding: {position: 5}
    default: {class: File, location: ../../bh20sequploader/bh20seq-shex.rdf}

outputs: []