| Mode | Name | Size | |
|---|---|---|---|
| -rw-r--r-- | arv-main.cwl | 1276 | logplain |
| -rw-r--r-- | collect-seqs.cwl | 880 | logplain |
| -rw-r--r-- | collect-seqs.py | 2580 | logplain |
| -rw-r--r-- | delete_entries_on_arvados.py | 1078 | logplain |
| -rw-r--r-- | dups2metadata.cwl | 357 | logplain |
| -rw-r--r-- | dups2metadata.py | 400 | logplain |
| -rw-r--r-- | merge-metadata.cwl | 1288 | logplain |
| -rw-r--r-- | merge-metadata.py | 1347 | logplain |
| -rw-r--r-- | odgi-build-from-spoa-gfa.cwl | 780 | logplain |
| -rw-r--r-- | odgi-build.cwl | 756 | logplain |
| -rw-r--r-- | odgi_to_rdf.cwl | 503 | logplain |
| -rw-r--r-- | pangenome-generate.cwl | 3464 | logplain |
| -rw-r--r-- | pangenome-generate_spoa.cwl | 3338 | logplain |
| -rw-r--r-- | relabel-seqs.cwl | 1287 | logplain |
| -rw-r--r-- | relabel-seqs.py | 1426 | logplain |
| -rw-r--r-- | seqwish.cwl | 750 | logplain |
| -rw-r--r-- | sort_fasta_by_quality_and_len.cwl | 566 | logplain |
| -rw-r--r-- | sort_fasta_by_quality_and_len.py | 1761 | logplain |
| -rw-r--r-- | spoa.cwl | 573 | logplain |
| -rw-r--r-- | testjob.yml | 415 | logplain |
 |
index : bh20-seq-resource | |
| Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis |
| aboutsummaryrefslogtreecommitdiff |