| Mode | Name | Size | |
|---|---|---|---|
| -rw-r--r-- | README.md | 486 | log plain |
| -rw-r--r-- | cleanup.py | 2140 | log plain |
| d--------- | create_sra_metadata | 116 | log plain |
| d--------- | dict_ontology_standardization | 262 | log plain |
| d--------- | docker | 38 | log plain |
| d--------- | download_genbank_data | 61 | log plain |
| -rw-r--r-- | fetch_from_genbank.cwl | 1133 | log plain |
| -rwxr-xr-x | foreach.sh | 444 | log plain |
| -rw-r--r-- | import.cwl | 668 | log plain |
| -rw-r--r-- | import_from_genbank.cwl | 676 | log plain |
| -rw-r--r-- | import_to_arvados.py | 318 | log plain |
| -rw-r--r-- | split_into_arrays.cwl | 731 | log plain |
| d--------- | submit_ebi / example | 34 | log plain |
| d--------- | update_virtuoso | 48 | log plain |
| -rw-r--r-- | upload.cwl | 299 | log plain |
 |
index : bh20-seq-resource | |
| Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis |
| about summary refs log tree commit diff |