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id: placeholder
license:
license_type: https://creativecommons.org/licenses/by/4.0/
title: "$strain"
attribution_name: "Mariah Taylor, Colleen B. Jonsson"
attribution_url: https://www.uthsc.edu/medicine/molecular-sciences/faculty-directory/jonsson.php
host:
host_id: "$sample_id"
host_species: http://purl.obolibrary.org/obo/NCBITaxon_9606
sample:
sample_id: "$sample_id"
specimen_source: [http://purl.obolibrary.org/obo/NCIT_C155831]
collection_date: "$collection_date"
collection_location: $location
virus:
virus_species: http://purl.obolibrary.org/obo/NCBITaxon_2697049
virus_strain: "$strain"
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632]
alignment_protocol: https://bio.tools/BWA#!
assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
additional_technology_information: "Oxford Nanopore MiniIon RNA long reads"
submitter:
authors: [Mariah Taylor, Colleen B. Jonsson]
submitter_name: [Mariah Taylor, Colleen B. Jonsson, Pjotr Prins]
submitter_address: UTHSC, Memphis, Tennessee 38163, USA
originating_lab: Regional Biocontainment Laboratory, Memphis, TN
submitter_sample_id: $sample_id
submitter_orcid: [https://orcid.org/0000-0002-2640-7672,https://orcid.org/0000-0002-8021-9162]
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