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id: placeholder
license:
license_type: https://creativecommons.org/licenses/by/4.0/
title: "Sample"
attribution_name: "John doe, Joe Boe, Jonny Oe"
attribution_url: http://covid19.genenetwork.org/id
host:
host_id: XX1
host_species: http://purl.obolibrary.org/obo/NCBITaxon_9606
host_sex: http://purl.obolibrary.org/obo/PATO_0000384
host_age: 20
host_age_unit: http://purl.obolibrary.org/obo/UO_0000036
host_health_status: http://purl.obolibrary.org/obo/NCIT_C25269
host_treatment: Process in which the act is intended to modify or alter host status (Compounds)
host_vaccination: [vaccines1,vaccine2]
ethnicity: http://purl.obolibrary.org/obo/HANCESTRO_0010
additional_host_information: Optional free text field for additional information
sample:
sample_id: Id of the sample as defined by the submitter
collector_name: Name of the person that took the sample
collecting_institution: Institute that was responsible of sampling
specimen_source: [http://purl.obolibrary.org/obo/NCIT_C155831,http://purl.obolibrary.org/obo/NCIT_C155835]
collection_date: "2020-01-01"
collection_location: http://www.wikidata.org/entity/Q148
sample_storage_conditions: frozen specimen
source_database_accession: [http://identifiers.org/insdc/LC522350.1#sequence]
additional_collection_information: Optional free text field for additional information
virus:
virus_species: http://purl.obolibrary.org/obo/NCBITaxon_2697049
virus_strain: SARS-CoV-2/human/CHN/HS_8/2020
technology:
assembly_method: "http://purl.obolibrary.org/obo/GENEPIO_0001628"
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0009173,http://www.ebi.ac.uk/efo/EFO_0009173]
alignment_protocol: Protocol used for assembly
sequencing_coverage: [70.0, 100.0]
additional_technology_information: Optional free text field for additional information
submitter:
authors: [John Doe, Joe Boe, Jonny Oe]
submitter_name: [John Doe]
submitter_address: John Doe's address
originating_lab: John Doe kitchen
lab_address: John Doe's address
provider: XXX1
submitter_sample_id: XXX2
publication: PMID00001113
submitter_orcid: [https://orcid.org/0000-0000-0000-0000,https://orcid.org/0000-0000-0000-0001]
additional_submitter_information: Optional free text field for additional information
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