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<h1 class="title">CONTACT</h1>
<div id="table-of-contents">
<h2>Table of Contents</h2>
<div id="text-table-of-contents">
<ul>
<li><a href="#org56be096">1. CONTACT and SUPPORT</a>
<ul>
<li><a href="#orgad45632">1.1. Oxford Nanopore Analysis</a></li>
<li><a href="#org9249189">1.2. Data from other sequencers</a></li>
<li><a href="#orga2650ba">1.3. Professional support</a></li>
<li><a href="#orgaf18932">1.4. E-mail</a></li>
</ul>
</li>
</ul>
</div>
</div>
<div id="outline-container-org56be096" class="outline-2">
<h2 id="org56be096"><span class="section-number-2">1</span> CONTACT and SUPPORT</h2>
<div class="outline-text-2" id="text-1">
<p>
COVID-19 PubSeq was created by a group of <a href="https://github.com/arvados/bh20-seq-resource/graphs/contributors">bioinformaticians</a> and
software developers working at leading institutes (see sponsors below)
with the goal of making online analysis available to everyone. You can
talk with us directly on a <a href="https://gitter.im/arvados/pubseq?utm_source=share-link&utm_medium=link&utm_campaign=share-link">gitter channel</a>. We are open to improving
work flows and analysis.
</p>
</div>
<div id="outline-container-orgad45632" class="outline-3">
<h3 id="orgad45632"><span class="section-number-3">1.1</span> Oxford Nanopore Analysis</h3>
<div class="outline-text-3" id="text-1-1">
<p>
<img class="img-right" src="static/image/oxford-nanopore.jpg" />
</p>
<p>
We run <a href="https://en.wikipedia.org/wiki/Oxford_Nanopore_Technologies">Oxford Nanopore</a> ourselves. It is an exaciting technology
because it gives us an accurate SARS-CoV-2 sequencer for a few
thousand dollars which can be run in a living room! With PubSeq we aim
to make it easy to analyse Nanopore material using our <b>free</b> Cloud
infrastructure. If you need help in using the online workflows don't
hesitate to contact us.
</p>
<p>
</br></br></br>
</p>
</div>
</div>
<div id="outline-container-org9249189" class="outline-3">
<h3 id="org9249189"><span class="section-number-3">1.2</span> Data from other sequencers</h3>
<div class="outline-text-3" id="text-1-2">
<p>
We accept FASTA sequences of SARS-CoV-2. Simply upload them using the
web form and/or REST API. No sign-up required! If you have large scale
short read data and require support we can discuss that. We also run
Illumina sequencing in several places.
</p>
</div>
</div>
<div id="outline-container-orga2650ba" class="outline-3">
<h3 id="orga2650ba"><span class="section-number-3">1.3</span> Professional support</h3>
<div class="outline-text-3" id="text-1-3">
<p>
To use COVID-19 PubSeq solutions for professional purposes you can
contact Boston based <a href="mailto:info@curii.com">Curii</a>, the creators of <a href="https://arvados.org/">Arvados</a>, directly.
</p>
<p>
COVID-19 is built on Arvados using CWL workflows.
</p>
</div>
</div>
<div id="outline-container-orgaf18932" class="outline-3">
<h3 id="orgaf18932"><span class="section-number-3">1.4</span> E-mail</h3>
<div class="outline-text-3" id="text-1-4">
<p>
For questions feel free to write directly to <a href="mailto:pjotr.public821@thebird.nl">Pjotr Prins</a>.
</p>
</div>
</div>
</div>
</div>
<div id="postamble" class="status">
<hr><small>Created by <a href="http://thebird.nl/">Pjotr Prins</a> (pjotr.public768 at thebird 'dot' nl) using Emacs org-mode and a healthy dose of Lisp!<br />Modified 2020-08-23 Sun 05:13</small>.
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