| Age | Commit message (Expand) | Author |
|---|---|---|
| 2020-04-28 | Update spodgi docker image•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-21 | Increase ram requirement for minimap2•••Add --kickoff to immediately start an analysis workflow. Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-21 | Workaround CWL limit by chunking file list•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-21 | Work around CWL content size limit by chunking•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-20 | Add readsMergeDedup.fasta to output•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-20 | Make sure there is a newline in relabeled fasta (but no blank lines) | Peter Amstutz |
| 2020-04-20 | Better handling of duplicate sequences•••Also save original fasta label in metadata | Peter Amstutz |
| 2020-04-20 | Relabel sequences to match metadata subjects.•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
| 2020-04-20 | Move workflows into main repo•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> | Peter Amstutz |
 |
index : bh20-seq-resource | |
| Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis |
| aboutsummaryrefslogtreecommitdiff |