Age | Commit message (Expand) | Author |
2020-04-28 | Update spodgi docker image•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-21 | Increase ram requirement for minimap2•••Add --kickoff to immediately start an analysis workflow.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-21 | Workaround CWL limit by chunking file list•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-21 | Work around CWL content size limit by chunking•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-20 | Add readsMergeDedup.fasta to output•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-20 | Make sure there is a newline in relabeled fasta (but no blank lines) | Peter Amstutz |
2020-04-20 | Better handling of duplicate sequences•••Also save original fasta label in metadata
| Peter Amstutz |
2020-04-20 | Relabel sequences to match metadata subjects.•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |
2020-04-20 | Move workflows into main repo•••Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
| Peter Amstutz |