index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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path:
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bh20simplewebuploader
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main.py
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Author
2020-07-15
Load metadata locally without pkg_resources
Pjotr Prins
2020-07-12
CounterDB
Pjotr Prins
2020-07-09
Skip certificate check - this was upstreamed in Arvados, so we can remove later
Pjotr Prins
2020-07-08
Add --revalidate and fix checking/updating properties.
Peter Amstutz
2020-07-08
Get count from arvados
Peter Amstutz
2020-07-08
Fetch status as anonymous user
Peter Amstutz
2020-07-08
Split upload tab. Add upload status tab.
Peter Amstutz
2020-06-17
Slighlty alter SPARQL query to truley sumarize locations for contients. Most ...
lltommy
2020-06-16
starting to include a map
lltommy
2020-06-15
Adding endpoints using grouping of continents
lltommy
2020-06-14
Tried to make a start with the 'demo' part, table works, drilling down not
lltommy
2020-06-12
Adding endpoint getCountByGPS which could be used to draw a map
lltommy
2020-06-11
Fixing #65 and adding additional country information
lltommy
2020-05-29
Blog stuff
Pjotr Prins
2020-05-28
Web: debugging metadata submission
Pjotr Prins
2020-05-27
Wiring up blog entries
Pjotr Prins
2020-05-24
Download page
Pjotr Prins
2020-05-24
Display About/FAQ
Pjotr Prins
2020-05-23
Menu and forms
Pjotr Prins
2020-05-23
Web: put in menu routing
Pjotr Prins
2020-05-16
Counting number of sequences
Pjotr Prins
2020-05-15
Adding labels to getDetails endpoint
lltommy
2020-05-15
Oops
Pjotr Prins
2020-05-15
Change submit button on click
Pjotr Prins
2020-05-14
Handle select values on the backend
Adam Novak
2020-05-13
Adding some more labels and adjusting some queries
lltommy
2020-05-05
Add JS at front end for lists, and date support on backend
Adam Novak
2020-05-05
Handle doubles and lists on the backend
Adam Novak
2020-04-29
fixing JS due to name changes so the demo works again
lltommy
2020-04-26
Pushing some new functions, rename some old ones
lltommy
2020-04-26
Adding a function, correcting some variable names
lltommy
2020-04-26
Jsonify response and pick the values
BonfaceKilz
2020-04-23
Adding API endpoints to drive the homepage. Dirty but functional
lltommy
2020-04-20
Use a date picker for any string 'date'
Adam Novak
2020-04-20
Support any number of series fields
Adam Novak
2020-04-20
Nicer headings for xxx2 fields and float support
Adam Novak
2020-04-17
Pull 'doc' from the schema through to the frontend
Adam Novak
2020-04-17
Remove extraneous prints
Adam Novak
2020-04-17
Create option dropdowns from an options file
Adam Novak
2020-04-17
Correct maximum file size message
Adam Novak
2020-04-17
Call URLs IRIs because that's more general
Adam Novak
2020-04-17
Don't use @id as a URL if no URL is found
Adam Novak
2020-04-17
Read schema from package resource
Adam Novak
2020-04-13
More testing and output
Pjotr Prins
2020-04-13
Format stack dump in output
Pjotr Prins
2020-04-12
Website: working on layout
Pjotr Prins
2020-04-10
Clarify supported formats and make web UI take FASTQ
Adam Novak
2020-04-10
This fixed
Pjotr Prins
2020-04-09
Put back in directory
Adam Novak
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