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AgeCommit message (Expand)Author
2020-04-10Add qc_fastaPeter Amstutz
2020-04-10Fix up fasta/fastq validationPeter Amstutz
2020-04-10Validate & propagate metadataPeter Amstutz
2020-04-10Merge pull request #6 from uniqueg/fa_fq_validation•••validate seq format with magic filePjotr Prins
2020-04-10Fixed TypeError: 'module' object is not callablePjotr Prins
2020-04-10validate seq format with magic fileAlex Kanitz
2020-04-10Updating schema and examples, including URIslltommy
2020-04-09Moved Guix documentation into separate file (as it confused people ;)Pjotr Prins
2020-04-09Add "sequencefile" for the metadata subject.Peter Amstutz
2020-04-09Adding functionality of turning keys into ontology terms (URI). This is work ...lltommy
2020-04-09Updating schema and examples. This is still work in progress but we get therelltommy
2020-04-08Fastq now runs through fastq2fasta pipeline•••then gets added to pangenome analysis. Peter Amstutz
2020-04-07Add metadata validation with schema-saladPeter Amstutz
2020-04-07Merge branch 'master' of https://github.com/arvados/bh20-seq-resourcelltommy
2020-04-07adding dummy metadata qc to the projectlltommy
2020-04-07Now moves collections into 'validated sequences' project•••Improve logging for seq service Fix uploader bug Runs workflow with all validated sequences. Peter Amstutz
2020-04-06- Added some output and run main() by default•••- Disabled ssl checking which does not work if you lack a certificate Pjotr Prins
2020-04-06Remove backup filePjotr Prins
2020-04-06Add service to automatically run a workflow on collections uploaded to a proj...Peter Amstutz
2020-04-06Now uploads dataPeter Amstutz
2020-04-06Start projectPeter Amstutz
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