bh20-seq-resource - Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis

Age	Commit message (Expand)	Author
2020-07-08	Try to fix lab_address wrong predicate, fix submitter shape on the way and ho...	lltommy
2020-05-29	Changed doc comment in schema	Pjotr Prins
2020-05-28	Web: debugging metadata submission	Pjotr Prins
2020-05-06	Adding additional frontend option (PATO_0001340) to QC	lltommy
2020-04-30	Last addition/edits to the meta data schema	lltommy
2020-04-28	Decision to settle for float instead of integers for the coverage	lltommy
2020-04-28	Changes to the structure - we use lists now instead of strings where it makes...	lltommy
2020-04-23	adding a submitter comment field	lltommy
2020-04-23	Adding a third sequence technology option	lltommy
2020-04-22	Forgot to add _id	lltommy
2020-04-22	Including restrictions to the host status	lltommy
2020-04-22	Small changes all around, trying to make the importer/metadata better	lltommy
2020-04-21	add noLinkCheck to specimen_source2	Peter Amstutz
2020-04-21	Tweak handling of "coverage" also fix typo	Peter Amstutz
2020-04-21	Working on NCBI import	Peter Amstutz
2020-04-21	Updated shex and manditory fields and stuff	lltommy
2020-04-20	Reconsidered these should be noLinkCheck	Peter Amstutz
2020-04-20	Add identity:true to collection_location	Peter Amstutz
2020-04-20	Schema changes from @LLTommy	Peter Amstutz
2020-04-20	Better handling of duplicate sequences	Peter Amstutz
2020-04-20	Making collection date and collection location MANDATORY fields, turning orci...	lltommy
2020-04-20	Fixing string -> URI in speciman, plus other things	lltommy
2020-04-19	small updates to the yaml schema, updating the example files	lltommy
2020-04-19	Updating NCBI dictonaries, adding UI options, small yaml schema changes	lltommy
2020-04-19	Merge pull request #24 from adamnovak/dropdowns	Pjotr Prins
2020-04-18	Extending yaml schema a bit and adding additional information for the UI	lltommy
2020-04-17	Copy NCIT IRIs back to schema doc	Adam Novak
2020-04-15	Typo: submitter_orchid -> submitter_orcid	Stian Soiland-Reyes
2020-04-15	Changing vaccination URI	lltommy
2020-04-14	Updated yaml schema and examples - plus ShEX shape to go along with it. Still...	lltommy
2020-04-13	Starting to turn values into IRIs ...	lltommy
2020-04-11	Adding noLinkCheck to root	lltommy
2020-04-11	Adding descriptions to the yml schema, slight changes to the yml schema	lltommy
2020-04-10	Propagating metadata to output works now.	Peter Amstutz
2020-04-10	Validate & propagate metadata	Peter Amstutz
2020-04-10	Updating schema and examples, including URIs	lltommy
2020-04-09	Add "sequencefile" for the metadata subject.	Peter Amstutz
2020-04-09	Adding functionality of turning keys into ontology terms (URI). This is work ...	lltommy
2020-04-09	Updating schema and examples. This is still work in progress but we get there	lltommy
2020-04-07	Add metadata validation with schema-salad	Peter Amstutz