bh20-seq-resource - Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis

Age	Commit message (Expand)	Author
2020-08-22	FASTQ in capitals	Pjotr Prins
2020-08-22	More on contacting	Pjotr Prins
2020-08-22	Repositioning content	Pjotr Prins
2020-08-22	Reorganize footer	Pjotr Prins
2020-08-22	Reworded blurb	Pjotr Prins
2020-08-22	Small text fixes	Pjotr Prins
2020-08-22	guix-deploy script	Pjotr Prins
2020-08-20	Update links to reflect latest workflow	Peter Amstutz
2020-08-19	Fix output parameters	Peter Amstutz
2020-08-19	Scaling pangenome generation	Peter Amstutz
2020-08-19	Consolidate steps to scale graph generation workflow	Peter Amstutz
2020-08-19	Merge pull request #101 from AndreaGuarracino/patch-3	Peter Amstutz
2020-08-19	used builtin hashlib md5 for the deduplication step	AndreaGuarracino
2020-08-19	Merge pull request #100 from AndreaGuarracino/patch-3	Peter Amstutz
2020-08-19	integrated the deduplication step in the sorting by quality and length script	AndreaGuarracino
2020-08-05	Merge pull request #99 from AndreaGuarracino/patch-2	Peter Amstutz
2020-07-27	added in the FAQ three questions from the BCC 2020 attendees	AndreaGuarracino
2020-07-27	added workflow to sort a multifasta by quality and length, and added the over...	AndreaGuarracino
2020-07-27	added spoa workflow in a low memory consumption mode	AndreaGuarracino
2020-07-27	new workflow for odgi building from spoa gfa	AndreaGuarracino
2020-07-27	updated org files, removing unuseful information and adding the BCC2020 video...	AndreaGuarracino
2020-07-27	updated homepage image, changing its name	AndreaGuarracino
2020-07-27	added thumbnail and big poster in the footer	AndreaGuarracino
2020-07-27	fixed repetition of CC licenses	Andrea Guarracino
2020-07-21	Updated REST API doc	Pjotr Prins
2020-07-21	sequencer/mapper	Pjotr Prins
2020-07-21	Sample date and specimen	Pjotr Prins
2020-07-21	Add sequencer JSON/XML output	Pjotr Prins
2020-07-21	Working on search	Pjotr Prins
2020-07-21	Documenting exports and REST API	Pjotr Prins
2020-07-20	Add apidoc end point to docs	Pjotr Prins
2020-07-20	Adding an endpoint for documentation	Pjotr Prins
2020-07-20	REST API HTML output	Pjotr Prins
2020-07-20	REST API	Pjotr Prins
2020-07-20	REST API	Pjotr Prins
2020-07-20	Start Public REST API	Pjotr Prins
2020-07-19	EBI form filling	Pjotr Prins
2020-07-19	Moch XML output	Pjotr Prins
2020-07-19	Search table	Pjotr Prins
2020-07-19	Search table	Pjotr Prins
2020-07-19	Wiring up export function	Pjotr Prins
2020-07-18	Map: cleanup CSS	Pjotr Prins
2020-07-18	Map: show count sequences	Pjotr Prins
2020-07-18	Map: import feature settings	Pjotr Prins
2020-07-18	Updating stylesheets and about page after receiving feedback.	Pjotr Prins
2020-07-17	Comment out some broken links for now	Peter Amstutz
2020-07-17	Make sure move_fastq_to_fasta_results gets everything	Peter Amstutz
2020-07-17	Merge branch 'master' of github.com:pjotrp/bh20-seq-resource	Pjotr Prins
2020-07-17	Preparing for EBI submission	Pjotr Prins
2020-07-17	Started EBI submission	Pjotr Prins