index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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Author
2020-04-10
Grab Erik
Adam Novak
2020-04-10
Add affiliation info
Adam Novak
2020-04-10
Add author and affiliation
Michael L Heuer
2020-04-10
Draft
Pjotr Prins
2020-04-10
Propagating metadata to output works now.
Peter Amstutz
2020-04-10
Improve fasta/fastq QC
Peter Amstutz
2020-04-10
Fix swapped fasta/fastq
Peter Amstutz
2020-04-10
Add qc_fasta
Peter Amstutz
2020-04-10
Fix up fasta/fastq validation
Peter Amstutz
2020-04-10
Validate & propagate metadata
Peter Amstutz
2020-04-10
Magic dependency
Pjotr Prins
2020-04-10
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-04-10
Merge pull request #6 from uniqueg/fa_fq_validation
Pjotr Prins
2020-04-10
Note on running container with Guix
Pjotr Prins
2020-04-10
This fixed
Pjotr Prins
2020-04-10
Fixed TypeError: 'module' object is not callable
Pjotr Prins
2020-04-10
Cleaned up Guix install instructions
Pjotr Prins
2020-04-10
validate seq format with magic file
Alex Kanitz
2020-04-10
Updating schema and examples, including URIs
lltommy
2020-04-10
Merge pull request #4 from adamnovak/add-web-ui
Pjotr Prins
2020-04-10
Merge pull request #3 from adamnovak/patch-1
Pjotr Prins
2020-04-09
Move the web uploader GUIX instructions to the GUIX file
Adam Novak
2020-04-09
Point to new repo for source
Adam Novak
2020-04-09
Merge remote-tracking branch 'upstream/master' into add-web-ui
Adam Novak
2020-04-09
Copy over/combine top-level project components
Adam Novak
2020-04-09
Merge branch 'move-repo' of ../bh20-simple-web-uploader into HEAD
Adam Novak
2020-04-09
Put back in directory
Adam Novak
2020-04-09
Notes
Pjotr Prins
2020-04-09
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-04-09
Moved Guix documentation into separate file (as it confused people ;)
Pjotr Prins
2020-04-09
Propagate metadata to pangenome so it can be merged by workflow
Peter Amstutz
2020-04-09
Spacing and typo
Pjotr Prins
2020-04-09
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-04-09
Add "sequencefile" for the metadata subject.
Peter Amstutz
2020-04-09
Make schema link nicer and add example files
Adam Novak
2020-04-09
Don't include pyc
Adam Novak
2020-04-09
Add auto-generated fillable metadata form
Adam Novak
2020-04-09
Adding functionality of turning keys into ontology terms (URI). This is work ...
lltommy
2020-04-09
Updating schema and examples. This is still work in progress but we get there
lltommy
2020-04-09
update my affiliation & ORCID
Michael R. Crusoe
2020-04-08
Add context links
Adam Novak
2020-04-08
Don't assert that the metadata is really JSON-LD
Adam Novak
2020-04-08
Fastq now runs through fastq2fasta pipeline
Peter Amstutz
2020-04-08
Initial commit of working frontend
Adam Novak
2020-04-08
Spell correctly
Adam Novak
2020-04-08
title
Pjotr Prins
2020-04-08
Paper
Pjotr Prins
2020-04-07
Merge pull request #2 from adamnovak/instructions
Peter Amstutz
2020-04-07
Add metadata validation with schema-salad
Peter Amstutz
2020-04-07
Make README more didactic
Adam Novak
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