index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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Author
2020-04-20
Use a date picker for any string 'date'
Adam Novak
2020-04-20
Support any number of series fields
Adam Novak
2020-04-20
Nicer headings for xxx2 fields and float support
Adam Novak
2020-04-20
Make doc not contradict option list
Adam Novak
2020-04-20
Put back Intersex with the closest PATO equivalent
Adam Novak
2020-04-20
Relabel sequences to match metadata subjects.
Peter Amstutz
2020-04-20
Move workflows into main repo
Peter Amstutz
2020-04-20
Add ShEx validation
Peter Amstutz
2020-04-20
Merge pull request #29 from inutano/fix-mappings
LLTommy
2020-04-20
Merge pull request #28 from AndreaGuarracino/patch-8
LLTommy
2020-04-20
fix MinION to ONT
Tazro Inutano Ohta
2020-04-20
Making collection date and collection location MANDATORY fields, turning orci...
lltommy
2020-04-20
Fixing string -> URI in speciman, plus other things
lltommy
2020-04-19
added 'np/op' control for specimen_source
Andrea Guarracino
2020-04-19
Further updates to our NCBI dictonaries to translate this s*** to our model
lltommy
2020-04-19
fixed missing variable and managed comma in dicts
Andrea Guarracino
2020-04-19
small updates to the yaml schema, updating the example files
lltommy
2020-04-19
Updating NCBI dictonaries, adding UI options, small yaml schema changes
lltommy
2020-04-19
Merge pull request #25 from AndreaGuarracino/patch-5
Pjotr Prins
2020-04-19
Merge 984f74f7d7219c83d280b6eee46cba4aed4298bb
Pjotr Prins
2020-04-19
Merge pull request #26 from AndreaGuarracino/patch-6
Pjotr Prins
2020-04-19
Merge branch 'master' into patch-6
Pjotr Prins
2020-04-19
Merge pull request #27 from AndreaGuarracino/patch-7
Pjotr Prins
2020-04-19
Merge pull request #24 from adamnovak/dropdowns
Pjotr Prins
2020-04-19
Merge pull request #23 from AndreaGuarracino/patch-3
Pjotr Prins
2020-04-19
Merge pull request #22 from AndreaGuarracino/patch-4
Pjotr Prins
2020-04-18
dictionaries for mapping
Andrea Guarracino
2020-04-18
ncbi_speciesman_source mapping
Andrea Guarracino
2020-04-18
Delete dict_ontology_standardization
Andrea Guarracino
2020-04-18
ncbi_speciesman_source mapping
Andrea Guarracino
2020-04-18
new script release
Andrea Guarracino
2020-04-18
accession list 2020/04/18
Andrea Guarracino
2020-04-18
Extending yaml schema a bit and adding additional information for the UI
lltommy
2020-04-17
Make ? link show doc info and a different link to the ontology IRI
Adam Novak
2020-04-17
Tooltip the whole label
Adam Novak
2020-04-17
Pull 'doc' from the schema through to the frontend
Adam Novak
2020-04-17
Copy NCIT IRIs back to schema doc
Adam Novak
2020-04-17
Spruce up the options file and add missing values
Adam Novak
2020-04-17
Remove extraneous prints
Adam Novak
2020-04-17
Create option dropdowns from an options file
Adam Novak
2020-04-17
Correct maximum file size message
Adam Novak
2020-04-17
Call URLs IRIs because that's more general
Adam Novak
2020-04-17
Don't use @id as a URL if no URL is found
Adam Novak
2020-04-17
Read schema from package resource
Adam Novak
2020-04-15
added type id check
Andrea Guarracino
2020-04-15
accessions list CoV-2 from NCBI Virus 2020/04/15
Andrea Guarracino
2020-04-15
Merge pull request #20 from stain/patch-1
Pjotr Prins
2020-04-15
Merge pull request #19 from AndreaGuarracino/patch-2
Pjotr Prins
2020-04-15
Typo: submitter_orchid -> submitter_orcid
Stian Soiland-Reyes
2020-04-15
submitter_orchid -> submitter_orcid
Stian Soiland-Reyes
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