index
:
bh20-seq-resource
analysis-refactor
fasta-subset-from-query
generate-cwl
master
new_assembly_method_field
pangenome_workflow_abpoa
upload-download-status
uuid-for-resource
yamlfa2ttl
Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
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Author
2020-05-15
Template: amended FASTQ/BAM info
Pjotr Prins
2020-05-15
Template: fix URL for example and added comment for using semweb URIs
Pjotr Prins
2020-05-14
Switch fasta identifiers to use a real working URL
Peter Amstutz
2020-05-14
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-14
Merge pull request #53 from adamnovak/handle-select
Pjotr Prins
2020-05-14
Workflow fixes
Peter Amstutz
2020-05-14
Handle select values on the backend
Adam Novak
2020-05-14
main.css: change color to darker
Pjotr Prins
2020-05-14
Working on BLOG
Pjotr Prins
2020-05-13
Merge branch 'master' of github.com:pjotrp/bh20-seq-resource
Pjotr Prins
2020-05-13
Virtuoso uploader: always upload countries and labels
Pjotr Prins
2020-05-13
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-13
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-13
Update paper.md
daniwelter
2020-05-13
Update paper.md
LLTommy
2020-05-13
Adding some more labels and adjusting some queries
lltommy
2020-05-13
Guix version of uploader works. Updated instructions.
Pjotr Prins
2020-05-13
Changed example not to make it a reference genome.
Pjotr Prins
2020-05-13
Merge branch 'master' of github.com:pjotrp/bh20-seq-resource
Pjotr Prins
2020-05-13
Virtuoso: split named graphs
Pjotr Prins
2020-05-13
Modified BLOG
Pjotr Prins
2020-05-12
Virtuoso uploader: does not delete graph yet
Pjotr Prins
2020-05-12
Update graph script
Pjotr Prins
2020-05-12
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-11
Merge pull request #49 from mr-c/add_pangenome_browser_prep
Peter Amstutz
2020-05-06
Adding additional frontend option (PATO_0001340) to QC
lltommy
2020-05-06
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-06
Merge pull request #50 from adamnovak/upload-lists
Pjotr Prins
2020-05-06
Merge branch 'master' of github.com:arvados/bh20-seq-resource
Pjotr Prins
2020-05-05
Add back necessary form-swapping javascript
Adam Novak
2020-05-05
Use invisible class instead of hidden class
Adam Novak
2020-05-05
Add JS at front end for lists, and date support on backend
Adam Novak
2020-05-05
Handle doubles and lists on the backend
Adam Novak
2020-05-05
preserve the directory layout of segmentation.py
Michael R. Crusoe
2020-05-05
move some tools into the shared repo
Michael R. Crusoe
2020-05-04
Sort input to hopefully get container reuse
Peter Amstutz
2020-05-04
bump jerven/spodgi image to 0.0.6
Peter Amstutz
2020-05-04
Remove debug flag from workflow submit
Peter Amstutz
2020-05-04
add pangenome browser prep
Michael R. Crusoe
2020-05-04
Increase RAM for minimap2
Peter Amstutz
2020-05-03
Set a RAM requirement on odgi_to_rdf to influence it to run on c5
Peter Amstutz
2020-05-01
Set verison tag on spodgi container image
Peter Amstutz
2020-04-30
Merge pull request #47 from AndreaGuarracino/patch-15
Peter Amstutz
2020-04-30
fixed UO_0000036 for year
Andrea Guarracino
2020-04-30
Add py-dateutil to dependencies.
Peter Amstutz
2020-04-30
Handle running in a container with no username
Peter Amstutz
2020-04-30
Last addition/edits to the meta data schema
lltommy
2020-04-30
Merge pull request #41 from AndreaGuarracino/patch-14
LLTommy
2020-04-30
Import script fixes
Peter Amstutz
2020-04-30
Wrap import script to run as a workflow
Peter Amstutz
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