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2020-04-10validate seq format with magic fileAlex Kanitz
2020-04-09Merge branch 'master' of github.com:arvados/bh20-seq-resourcePjotr Prins
2020-04-09Moved Guix documentation into separate file (as it confused people ;)Pjotr Prins
2020-04-09Propagate metadata to pangenome so it can be merged by workflowPeter Amstutz
2020-04-09Merge branch 'master' of github.com:arvados/bh20-seq-resourcePjotr Prins
2020-04-09Add "sequencefile" for the metadata subject.Peter Amstutz
2020-04-09Adding functionality of turning keys into ontology terms (URI). This is work ↵lltommy
in progress - of course!
2020-04-09Updating schema and examples. This is still work in progress but we get therelltommy
2020-04-08Fastq now runs through fastq2fasta pipelinePeter Amstutz
then gets added to pangenome analysis.
2020-04-08titlePjotr Prins
2020-04-08PaperPjotr Prins
2020-04-07Merge pull request #2 from adamnovak/instructionsPeter Amstutz
Make README more didactic
2020-04-07Add metadata validation with schema-saladPeter Amstutz
2020-04-07Make README more didacticAdam Novak
2020-04-07limit 1Peter Amstutz
2020-04-07Copy recent results to a set destinationPeter Amstutz
2020-04-07Note on upload-resumePjotr Prins
2020-04-07Merge branch 'master' of https://github.com/arvados/bh20-seq-resourcelltommy
2020-04-07adding dummy metadata qc to the projectlltommy
2020-04-07Now moves collections into 'validated sequences' projectPeter Amstutz
Improve logging for seq service Fix uploader bug Runs workflow with all validated sequences.
2020-04-06Merge pull request #1 from pjotrp/masterPeter Amstutz
Installation notes
2020-04-06Add note on workflowPjotr Prins
2020-04-06README and examplePjotr Prins
2020-04-06- Added some output and run main() by defaultPjotr Prins
- Disabled ssl checking which does not work if you lack a certificate
2020-04-06ignorePjotr Prins
2020-04-06Remove backup filePjotr Prins
2020-04-06Add service to automatically run a workflow on collections uploaded to a ↵Peter Amstutz
project.
2020-04-06Now uploads dataPeter Amstutz
2020-04-06Start projectPeter Amstutz
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