diff options
Diffstat (limited to 'workflows/pull-data/genbank')
| -rwxr-xr-x | workflows/pull-data/genbank/transform-genbank-xml2yamlfa.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pull-data/genbank/transform-genbank-xml2yamlfa.py b/workflows/pull-data/genbank/transform-genbank-xml2yamlfa.py index 1f7a428..3b9813c 100755 --- a/workflows/pull-data/genbank/transform-genbank-xml2yamlfa.py +++ b/workflows/pull-data/genbank/transform-genbank-xml2yamlfa.py @@ -54,7 +54,7 @@ for xmlfn in args.files: jsonfn = basename + ".json" with open(jsonfn, 'w') as outfile: print(f" writing {jsonfn}") - json.dump(meta, outfile, indent=4) + json.dump(meta, outfile, indent=2) # --- write FASTA fa = basename+".fa" seq = genbank.get_sequence(id,gb) |