diff options
Diffstat (limited to 'workflows/pull-data/genbank/README.md')
| -rw-r--r-- | workflows/pull-data/genbank/README.md | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pull-data/genbank/README.md b/workflows/pull-data/genbank/README.md index 0204dd0..22dd920 100644 --- a/workflows/pull-data/genbank/README.md +++ b/workflows/pull-data/genbank/README.md @@ -6,7 +6,7 @@ sparql-fetch-ids > pubseq_ids.txt # --- fetch XML update-from-genbank --skip pubseq_ids.txt --max 100 --outdir ~/tmp/genbank # --- get new IDs -genbank-fetch-ids --dir ~/tmp/pubseq > genbank_ids.txt +genbank-fetch-ids > genbank_ids.txt # --- loop through IDs (pseudo code) for id in genbank_ids.txt: transform-genbank-xml2yamlfa --dir ~/tmp/genbank id --outdir ~/tmp/pubseq |