1 files changed, 18 insertions, 0 deletions
diff --git a/workflows/pangenome-generate/merge-metadata.cwl b/workflows/pangenome-generate/merge-metadata.cwl
new file mode 100644
index 0000000..9164c09
--- /dev/null
+++ b/workflows/pangenome-generate/merge-metadata.cwl
@@ -0,0 +1,18 @@
+cwlVersion: v1.1
+class: CommandLineTool
+hints:
+  DockerRequirement:
+    dockerPull: commonworkflowlanguage/cwltool_module
+inputs:
+  metadata: File[]
+  metadataSchema: File
+  subjects: string[]
+outputs:
+  merged: stdout
+stdout: mergedmetadata.ttl
+requirements:
+  InitialWorkDirRequirement:
+    listing:
+      - entry: {$include: merge-metadata.py}
+        entryname: merge-metadata.py
+baseCommand: [python3, merge-metadata.py]