diff options
Diffstat (limited to 'workflows/pangenome-generate/arv-main.cwl')
| -rw-r--r-- | workflows/pangenome-generate/arv-main.cwl | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/workflows/pangenome-generate/arv-main.cwl b/workflows/pangenome-generate/arv-main.cwl index 8d7f83b..dae47e6 100644 --- a/workflows/pangenome-generate/arv-main.cwl +++ b/workflows/pangenome-generate/arv-main.cwl @@ -21,7 +21,7 @@ outputs: outputSource: pangenome-generate/odgiRDF readsMergeDedup: type: File - outputSource: pangenome-generate/readsMergeDedup + outputSource: pangenome-generate/readsMergeDedupSortedByQualAndLen mergedMetadata: type: File outputSource: pangenome-generate/mergedMetadata @@ -45,4 +45,4 @@ steps: seqs: collect-seqs/relabeledSeqs metadata: collect-seqs/mergedMetadata exclude: exclude - out: [odgiGraph, spoaGFA, odgiRDF, readsMergeDedup, mergedMetadata] + out: [odgiGraph, spoaGFA, odgiRDF, readsMergeDedupSortedByQualAndLen, mergedMetadata] |