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Diffstat (limited to 'scripts/upload.cwl')
| -rw-r--r-- | scripts/upload.cwl | 13 |
1 files changed, 13 insertions, 0 deletions
diff --git a/scripts/upload.cwl b/scripts/upload.cwl new file mode 100644 index 0000000..0fed09a --- /dev/null +++ b/scripts/upload.cwl @@ -0,0 +1,13 @@ +cwlVersion: v1.1 +class: CommandLineTool +inputs: + fasta: File + metadata: File +outputs: [] +requirements: + DockerRequirement: + dockerPull: bh20-seq-uploader/import + NetworkAccess: + networkAccess: true +baseCommand: bh20-seq-uploader +arguments: [--skip-qc, $(inputs.metadata), $(inputs.fasta)] |