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Diffstat (limited to 'scripts/import.cwl')
-rw-r--r-- | scripts/import.cwl | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/scripts/import.cwl b/scripts/import.cwl new file mode 100644 index 0000000..81752c8 --- /dev/null +++ b/scripts/import.cwl @@ -0,0 +1,24 @@ +cwlVersion: v1.1 +class: CommandLineTool +baseCommand: python3 +inputs: + scripts: + type: File + default: + class: File + location: import_to_arvados.py + inputBinding: {position: 1} + importScript: + type: File + default: + class: File + location: from_genbank_to_fasta_and_yaml.py + inputBinding: {position: 2} +outputs: [] +requirements: + DockerRequirement: + dockerPull: bh20-seq-uploader/import + NetworkAccess: + networkAccess: true + WorkReuse: + workReuse: false |