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-rwxr-xr-xscripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py2
1 files changed, 2 insertions, 0 deletions
diff --git a/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py b/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py
index 87b348b..9a46474 100755
--- a/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py
+++ b/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py
@@ -179,6 +179,8 @@ for path_metadata_xxx_xml in [os.path.join(dir_metadata, name_metadata_xxx_xml)
else:
info_for_yaml_dict['submitter']['additional_submitter_information'] = GBReference_journal.text
+ # This script download and prepare data and metadata for assemblies samples
+ info_for_yaml_dict['technology']['assembly_method'] = 'http://purl.obolibrary.org/obo/GENEPIO_0001628'
GBSeq_comment = GBSeq.find('GBSeq_comment')
if GBSeq_comment is not None and 'Assembly-Data' in GBSeq_comment.text: