aboutsummaryrefslogtreecommitdiff
path: root/example
diff options
context:
space:
mode:
Diffstat (limited to 'example')
-rw-r--r--example/esr_example.yaml2
-rw-r--r--example/maximum_metadata_example.yaml2
-rw-r--r--example/uthsc_example.yaml2
3 files changed, 3 insertions, 3 deletions
diff --git a/example/esr_example.yaml b/example/esr_example.yaml
index 48b11e4..b3e97d5 100644
--- a/example/esr_example.yaml
+++ b/example/esr_example.yaml
@@ -24,7 +24,7 @@ virus:
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
- sequence_assembly_method: https://github.com/ESR-NZ/NZ_SARS-CoV-2_genomics
+ alignment_protocol: https://github.com/ESR-NZ/NZ_SARS-CoV-2_genomics
additional_technology_information: "Artic V3 workflow"
submitter:
diff --git a/example/maximum_metadata_example.yaml b/example/maximum_metadata_example.yaml
index 54736f8..cd8890d 100644
--- a/example/maximum_metadata_example.yaml
+++ b/example/maximum_metadata_example.yaml
@@ -35,7 +35,7 @@ virus:
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0009173,http://www.ebi.ac.uk/efo/EFO_0009173]
- sequence_assembly_method: Protocol used for assembly
+ alignment_protocol: Protocol used for assembly
sequencing_coverage: [70.0, 100.0]
additional_technology_information: Optional free text field for additional information
diff --git a/example/uthsc_example.yaml b/example/uthsc_example.yaml
index 956faf1..3bdbf6f 100644
--- a/example/uthsc_example.yaml
+++ b/example/uthsc_example.yaml
@@ -24,7 +24,7 @@ virus:
technology:
sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0008632] // Nanopore MinION
- sequence_assembly_method: guppy
+ alignment_protocol: guppy
additional_technology_information: Optional free text field for additional information
submitter: