diff options
Diffstat (limited to 'bh20simplewebuploader')
| -rw-r--r-- | bh20simplewebuploader/templates/form.html | 42 |
1 files changed, 34 insertions, 8 deletions
diff --git a/bh20simplewebuploader/templates/form.html b/bh20simplewebuploader/templates/form.html index 839f22f..af8c856 100644 --- a/bh20simplewebuploader/templates/form.html +++ b/bh20simplewebuploader/templates/form.html @@ -130,6 +130,9 @@ <section class="header"> <div class="logo"><a href="https://github.com/tylermorganwall/coronaobj/"><img src="static/image/coronasmallcomp.gif" width="150" /></a></div> <h1>Web Uploader for Public SARS-CoV-2 Sequence Resource</h1> + +<small>Disabled until we got everything wired up</small> + </section> <hr> @@ -152,25 +155,28 @@ </p> <div class="fasta-file-select"> - <label for="fasta">Select FASTA file of assembled genome (max 40K), or FASTQ of reads (max 50MB):</label> + <label for="fasta">Select FASTA file of assembled genome (max 50K), or FASTQ of reads (max 500MB):</label> <br> <input type="file" id="fasta" name="fasta" accept=".fa,.fasta,.fna,.fq" required> <br> + <small> + Note that by uploading your data you automatically agree to a <a hef="https://creativecommons.org/licenses/by/4.0/">CC-BY-4.0 license</a>. </small> </div> <div class="metadata"> <label>Select metadata submission method:</label> <br> - <input type="radio" id="metadata_upload" name="metadata_type" value="upload" onchange="setMode()" checked required> - <label for="metadata_upload">Upload metadata file</label> - <input type="radio" id="metadata_form" name="metadata_type" value="fill" onchange="setMode()" required> + <input type="radio" id="metadata_form" name="metadata_type" value="fill" onchange="setMode()" checked required> <label for="metadata_form">Fill in metadata manually</label> + <input type="radio" id="metadata_upload" name="metadata_type" value="upload" onchange="setMode()" required> + <label for="metadata_upload">Upload metadata file</label> <br> + <small>Make sure the metadata has submitter attribution details.</small> </div> <div id="metadata_upload_form_spot"> <div id="metadata_upload_form"> - <label for="metadata">Select JSON or YAML metadata file following <a href="https://github.com/arvados/bh20-seq-resource/blob/master/bh20sequploader/bh20seq-schema.yml" target="_blank">this schema</a> (<a href="https://github.com/arvados/bh20-seq-resource/blob/master/example/metadata.yaml" target="_blank">Example 1</a>, <a href="https://github.com/arvados/bh20-seq-resource/blob/master/example/minimal_example.yaml" target="_blank">Example 2</a>, max 1MB):</label> + <label for="metadata">Select JSON or YAML metadata file following <a href="https://github.com/arvados/bh20-seq-resource/blob/master/bh20sequploader/bh20seq-schema.yml" target="_blank">this schema</a> and <a href="https://github.com/arvados/bh20-seq-resource/blob/master/example/metadata.yaml" target="_blank">example</a> (max 50K):</label> <br> <input type="file" id="metadata" name="metadata" accept=".json,.yml,.yaml" required> <br> @@ -206,11 +212,31 @@ </div> - <input class="submit" type="submit" value="Add to Pangenome"> +<input class="submit" type="submit" value="Add to Pangenome" disabled> </form> </section> - <hr> - <small><a href="https://github.com/arvados/bh20-seq-resource">Source</a> · Made for <a href="https://github.com/virtual-biohackathons/covid-19-bh20">COVID-19-BH20</a></small> +<hr> +<br> +<div class="intro"> + <h3>ABOUT</h3> + <small>This a public repository created at the COVID-19 BioHackathon + that has a low barrier to entry for uploading sequence data using + best practices. I.e., data is published with a creative commons + 4.0 (CC-4.0) license with metadata using state-of-the art + standards and, perhaps most importantly, providing standardized + workflows that get triggered on upload, so that results are + immediately available in standardized data formats. The repository + will be maintained and expanded for the duration of the + pandemic. To contribute data simply upload it! To contribute code + and/or workflows see + the <a href="https://github.com/arvados/bh20-seq-resource">project + repository</a>. For more information see the <a href="https://github.com/arvados/bh20-seq-resource/blob/master/paper/paper.md">paper</a> (WIP).</small> +</p> + <br> + + <hr> + <small><a href="https://github.com/arvados/bh20-seq-resource">Source</a> · Made for <a href="https://github.com/virtual-biohackathons/covid-19-bh20">COVID-19-BH20</a> | For more information E-mail pjotr.public444 at thebird.nl + </small> <a href="https://github.com/virtual-biohackathons/covid-19-bh20"> <img src="static/image/covid19biohackathon.png" align="right" width="300"></a> |