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-rw-r--r--bh20simplewebuploader/templates/home.html24
1 files changed, 17 insertions, 7 deletions
diff --git a/bh20simplewebuploader/templates/home.html b/bh20simplewebuploader/templates/home.html
index eb57f26..cfc3506 100644
--- a/bh20simplewebuploader/templates/home.html
+++ b/bh20simplewebuploader/templates/home.html
@@ -12,13 +12,21 @@
<p>
COVID-19 PubSeq is a free and open online
bioinformatics public sequence resource with
- on-the-fly analysis of sequenced SARS-CoV-2
+ on-the-fly analysis of
+ sequenced <a href="https://pubmed.ncbi.nlm.nih.gov/?term=sars-cov-2&sort=date">SARS-CoV-2</a>
samples that allows for a quick turnaround in
identification of new virus strains. PubSeq allows
anyone to upload sequence material in the form of
FASTA or FASTQ files with accompanying metadata
- through the <a href="/upload">web interface</a> or <a href="/apidoc">REST API</a>. For more information see the <a href="/about">FAQ!</a>.
+ through the <a href="/upload">web interface</a>
+ or <a href="/apidoc">REST API</a>. For more
+ information see the <a href="/about">FAQ!</a>.
</p>
+ <section id="map_view" class="map">
+ <div id="mapid"></div>
+ </section>
+
+ <a href="https://projectredcap.org/"><img class="img-right" src="static/image/REDCap.png" /></a>
<p>
Make your sequence
data <a href="https://en.wikipedia.org/wiki/FAIR_data">FAIR</a>. Upload
@@ -40,10 +48,16 @@
a <a href="https://creativecommons.org/licenses/by/4.0/">Creative
Commons license</a> You can take the published
(GFA/RDF/FASTA) data and store it in a triple
- store for further processing. Clinical data can
+ store for further processing.
+ Clinical data can
be stored securely
at <a href="https://redcap-covid19.elixir-luxembourg.org/redcap/">REDCap</a>.
</p>
+ <a href="https://nanoporetech.com/"><img class="img-right" src="static/image/oxford-nanopore2.jpg" /></a>
+ <p>
+ We give special attention to workflows for the <a href="https://nanoporetech.com/">Oxford Nanopore</a> - see <a href="https://pubmed.ncbi.nlm.nih.gov/?term=sars-cov-2+nanopore&sort=date">pubmed</a> - because it offers an affordable platform that is great
+ for SARS-CoV-2 sequencing.
+ </p>
<p>
Note that form fields contain
web <a href="https://en.wikipedia.org/wiki/Web_Ontology_Language">ontology
@@ -55,10 +69,6 @@
</div>
</section>
- <section id="map_view" class="map">
- <div id="mapid"></div>
- </section>
-
{% include 'footer.html' %}