aboutsummaryrefslogtreecommitdiff
path: root/bh20sequploader
diff options
context:
space:
mode:
Diffstat (limited to 'bh20sequploader')
-rw-r--r--bh20sequploader/bh20seq-schema.yml6
1 files changed, 5 insertions, 1 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml
index c48ebce..5000f08 100644
--- a/bh20sequploader/bh20seq-schema.yml
+++ b/bh20sequploader/bh20seq-schema.yml
@@ -78,11 +78,13 @@ $graph:
type: string?
jsonldPredicate:
_id: http://purl.obolibrary.org/obo/OBI_0001479
+ _type: "@id"
specimen_source2:
doc: Method how the specimen was derived as NCIT IRI, e.g. http://purl.obolibrary.org/obo/NCIT_C155835 (=throat swabb)
type: string?
jsonldPredicate:
_id: http://purl.obolibrary.org/obo/OBI_0001479
+ _type: "@id"
collection_date:
doc: Date when the sample was taken
type: string?
@@ -95,7 +97,7 @@ $graph:
_id: http://purl.obolibrary.org/obo/GAZ_00000448
_type: "@id"
sample_storage_conditions:
- doc: Information aboout storage of a specified type, e.g. frozen specimen, paraffin, fresh ....
+ doc: Information about storage of a specified type, e.g. frozen specimen, paraffin, fresh ....
type: string?
jsonldPredicate:
_id: http://purl.obolibrary.org/obo/OBI_0001472
@@ -138,11 +140,13 @@ $graph:
type: string
jsonldPredicate:
_id: http://purl.obolibrary.org/obo/OBI_0600047
+ _type: "@id"
sample_sequencing_technology2:
doc: Technology that was used to sequence this sample (e.g Sanger, Nanopor MiniION)
type: string?
jsonldPredicate:
_id: http://purl.obolibrary.org/obo/OBI_0600047
+ _type: "@id"
sequence_assembly_method:
doc: Protocol which provides instructions on the alignment of sequencing reads to reference genome
type: string?