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Diffstat (limited to 'bh20sequploader/main.py')
| -rw-r--r-- | bh20sequploader/main.py | 3 |
1 files changed, 3 insertions, 0 deletions
diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py index d5de63e..80c33c8 100644 --- a/bh20sequploader/main.py +++ b/bh20sequploader/main.py @@ -40,7 +40,10 @@ def qc_stuff(metadata, sequence_p1, sequence_p2, do_qc=True): log.debug("FASTA/FASTQ QC" if do_qc else "Limited FASTA/FASTQ QC") target.append(qc_fasta(sequence_p1, check_with_mimimap2=do_qc)) if sequence_p2: + if target[0][2] == 'text/fasta': + raise ValueError("It is possible to upload just one FASTA file at a time") target.append(qc_fasta(sequence_p2)) + target[0] = ("reads_1."+target[0][0][6:], target[0][1]) target[1] = ("reads_2."+target[1][0][6:], target[0][1]) except Exception as e: |