diff options
Diffstat (limited to 'bh20sequploader/main.py')
| -rw-r--r-- | bh20sequploader/main.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py index dc63bfc..cdc4c3f 100644 --- a/bh20sequploader/main.py +++ b/bh20sequploader/main.py @@ -24,7 +24,7 @@ UPLOAD_PROJECT='lugli-j7d0g-n5clictpuvwk8aa' def qc_stuff(metadata, sequence_p1, sequence_p2, do_qc=True): try: - log.debug("Checking metadata") + log.debug("Checking metadata" if do_qc else "Skipping metadata check") if do_qc and not qc_metadata(metadata.name): log.warning("Failed metadata qc") exit(1) @@ -36,7 +36,7 @@ def qc_stuff(metadata, sequence_p1, sequence_p2, do_qc=True): target = [] try: - log.debug("Checking FASTA/FASTQ QC") + log.debug("FASTA/FASTQ QC" if do_qc else "Limited FASTA/FASTQ QC") target.append(qc_fasta(sequence_p1, check_with_clustalw=do_qc)) if sequence_p2: target.append(qc_fasta(sequence_p2)) |