diff options
Diffstat (limited to 'bh20sequploader/bh20seq-schema.yml')
| -rw-r--r-- | bh20sequploader/bh20seq-schema.yml | 12 |
1 files changed, 9 insertions, 3 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml index c48ebce..64008f2 100644 --- a/bh20sequploader/bh20seq-schema.yml +++ b/bh20sequploader/bh20seq-schema.yml @@ -78,24 +78,26 @@ $graph: type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001479 + _type: "@id" specimen_source2: doc: Method how the specimen was derived as NCIT IRI, e.g. http://purl.obolibrary.org/obo/NCIT_C155835 (=throat swabb) type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001479 + _type: "@id" collection_date: doc: Date when the sample was taken - type: string? + type: string jsonldPredicate: _id: http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25164 collection_location: doc: Geographical location where the sample was collected as wikidata reference, e.g. http://www.wikidata.org/entity/Q148 (China) - type: string? + type: string jsonldPredicate: _id: http://purl.obolibrary.org/obo/GAZ_00000448 _type: "@id" sample_storage_conditions: - doc: Information aboout storage of a specified type, e.g. frozen specimen, paraffin, fresh .... + doc: Information about storage of a specified type, e.g. frozen specimen, paraffin, fresh .... type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0001472 @@ -138,11 +140,13 @@ $graph: type: string jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0600047 + _type: "@id" sample_sequencing_technology2: doc: Technology that was used to sequence this sample (e.g Sanger, Nanopor MiniION) type: string? jsonldPredicate: _id: http://purl.obolibrary.org/obo/OBI_0600047 + _type: "@id" sequence_assembly_method: doc: Protocol which provides instructions on the alignment of sequencing reads to reference genome type: string? @@ -210,6 +214,8 @@ $graph: type: string? jsonldPredicate: _id: http://semanticscience.org/resource/SIO_000115 + _type: "@id" + noLinkCheck: true - name: MainSchema type: record |